Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
DEFA4P12838 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.55□□□□□ -0.08
DEFA4P12838 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.55□□□□□ -0.08
DEFA4P12838 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.55□□□□□ -0.08
DEFA4P12838 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 AL355075.4-201ENST00000554988 638 ntBASIC14.55□□□□□ -0.08
DEFA4P12838 AC009065.1-201ENST00000564055 1225 ntBASIC14.55□□□□□ -0.08
DEFA4P12838 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
DEFA4P12838 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
DEFA4P12838 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.55□□□□□ -0.08
DEFA4P12838 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.55□□□□□ -0.08
DEFA4P12838 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.55□□□□□ -0.08
DEFA4P12838 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
DEFA4P12838 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 GMCL1P1-201ENST00000463439 1581 ntBASIC14.55□□□□□ -0.08
DEFA4P12838 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
DEFA4P12838 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
DEFA4P12838 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.54□□□□□ -0.08
DEFA4P12838 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.54□□□□□ -0.08
DEFA4P12838 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
DEFA4P12838 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
DEFA4P12838 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 AC022211.2-201ENST00000585075 2527 ntBASIC14.54□□□□□ -0.08
DEFA4P12838 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
DEFA4P12838 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.54□□□□□ -0.08
DEFA4P12838 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.54□□□□□ -0.08
DEFA4P12838 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.54□□□□□ -0.08
DEFA4P12838 NAPSB-206ENST00000562112 1266 ntBASIC14.54□□□□□ -0.08
DEFA4P12838 AL023803.3-201ENST00000615559 522 ntBASIC14.54□□□□□ -0.08
DEFA4P12838 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
DEFA4P12838 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.54□□□□□ -0.08
DEFA4P12838 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.54□□□□□ -0.08
DEFA4P12838 KRT8P7-201ENST00000533003 1432 ntBASIC14.54□□□□□ -0.08
DEFA4P12838 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.54□□□□□ -0.08
DEFA4P12838 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
DEFA4P12838 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
DEFA4P12838 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
DEFA4P12838 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.53□□□□□ -0.08
DEFA4P12838 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
DEFA4P12838 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.53□□□□□ -0.08
DEFA4P12838 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 AC141586.5-201ENST00000624546 2050 ntBASIC14.53□□□□□ -0.08
DEFA4P12838 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
DEFA4P12838 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.53□□□□□ -0.08
DEFA4P12838 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
DEFA4P12838 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 KRT8P50-201ENST00000562022 1438 ntBASIC14.53□□□□□ -0.08
DEFA4P12838 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.53□□□□□ -0.08
DEFA4P12838 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.53□□□□□ -0.08
DEFA4P12838 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DEFA4P12838 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.53□□□□□ -0.08
DEFA4P12838 AL512604.3-201ENST00000569583 964 ntBASIC14.53□□□□□ -0.08
DEFA4P12838 MIR4674-201ENST00000582457 87 ntBASIC14.53□□□□□ -0.08
DEFA4P12838 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.53□□□□□ -0.08
DEFA4P12838 AC010653.2-201ENST00000623505 997 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms