Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
TOP2AP11388 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TOP2AP11388 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC30.97■■■□□ 2.55
TOP2AP11388 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TOP2AP11388 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TOP2AP11388 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TOP2AP11388 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC30.96■■■□□ 2.55
TOP2AP11388 SMN2-210ENST00000511812 867 ntTSL 2 BASIC30.96■■■□□ 2.55
TOP2AP11388 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC30.96■■■□□ 2.55
TOP2AP11388 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC30.96■■■□□ 2.55
TOP2AP11388 METTL23-205ENST00000588302 925 ntTSL 5 BASIC30.96■■■□□ 2.55
TOP2AP11388 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC30.96■■■□□ 2.55
TOP2AP11388 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TOP2AP11388 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC30.96■■■□□ 2.55
TOP2AP11388 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TOP2AP11388 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
TOP2AP11388 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
TOP2AP11388 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
TOP2AP11388 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
TOP2AP11388 ACTG1P14-201ENST00000446382 1122 ntBASIC30.95■■■□□ 2.55
TOP2AP11388 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC30.95■■■□□ 2.55
TOP2AP11388 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC30.95■■■□□ 2.55
TOP2AP11388 CYB561-216ENST00000582297 897 ntTSL 3 BASIC30.95■■■□□ 2.55
TOP2AP11388 AC106028.4-201ENST00000614509 607 ntBASIC30.95■■■□□ 2.55
TOP2AP11388 AL590787.1-201ENST00000568856 1315 ntBASIC30.95■■■□□ 2.55
TOP2AP11388 AC097637.2-201ENST00000624096 1997 ntBASIC30.95■■■□□ 2.54
TOP2AP11388 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
TOP2AP11388 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
TOP2AP11388 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
TOP2AP11388 EFTUD1P1-204ENST00000560401 1798 ntBASIC30.95■■■□□ 2.54
TOP2AP11388 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC30.94■■■□□ 2.54
TOP2AP11388 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
TOP2AP11388 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
TOP2AP11388 CALY-203ENST00000368558 825 ntTSL 5 BASIC30.94■■■□□ 2.54
TOP2AP11388 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC30.94■■■□□ 2.54
TOP2AP11388 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC30.94■■■□□ 2.54
TOP2AP11388 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
TOP2AP11388 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
TOP2AP11388 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
TOP2AP11388 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC30.94■■■□□ 2.54
TOP2AP11388 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
TOP2AP11388 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TOP2AP11388 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TOP2AP11388 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TOP2AP11388 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
TOP2AP11388 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC30.93■■■□□ 2.54
TOP2AP11388 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
TOP2AP11388 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
TOP2AP11388 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
TOP2AP11388 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
TOP2AP11388 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TOP2AP11388 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TOP2AP11388 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TOP2AP11388 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC30.93■■■□□ 2.54
TOP2AP11388 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TOP2AP11388 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TOP2AP11388 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
TOP2AP11388 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TOP2AP11388 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
TOP2AP11388 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
TOP2AP11388 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC30.92■■■□□ 2.54
TOP2AP11388 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
TOP2AP11388 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
TOP2AP11388 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
TOP2AP11388 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
TOP2AP11388 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
TOP2AP11388 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TOP2AP11388 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TOP2AP11388 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TOP2AP11388 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC30.92■■■□□ 2.54
TOP2AP11388 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
TOP2AP11388 AC022145.2-201ENST00000598203 171 ntBASIC30.92■■■□□ 2.54
TOP2AP11388 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
TOP2AP11388 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
TOP2AP11388 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC30.92■■■□□ 2.54
TOP2AP11388 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC30.92■■■□□ 2.54
TOP2AP11388 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC30.92■■■□□ 2.54
TOP2AP11388 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
TOP2AP11388 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TOP2AP11388 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TOP2AP11388 AC025580.3-201ENST00000617932 1424 ntBASIC30.91■■■□□ 2.54
TOP2AP11388 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TOP2AP11388 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC30.91■■■□□ 2.54
TOP2AP11388 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC30.91■■■□□ 2.54
TOP2AP11388 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
TOP2AP11388 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
TOP2AP11388 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TOP2AP11388 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
TOP2AP11388 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TOP2AP11388 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC30.9■■■□□ 2.54
TOP2AP11388 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TOP2AP11388 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TOP2AP11388 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
TOP2AP11388 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC30.9■■■□□ 2.54
TOP2AP11388 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TOP2AP11388 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC30.9■■■□□ 2.54
TOP2AP11388 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC30.9■■■□□ 2.54
TOP2AP11388 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC30.9■■■□□ 2.54
TOP2AP11388 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
TOP2AP11388 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC30.9■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms