Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.75■□□□□ 0.59
RARAP10276 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RARAP10276 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.75■□□□□ 0.59
RARAP10276 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.75■□□□□ 0.59
RARAP10276 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.75■□□□□ 0.59
RARAP10276 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.75■□□□□ 0.59
RARAP10276 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.75■□□□□ 0.59
RARAP10276 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.75■□□□□ 0.59
RARAP10276 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RARAP10276 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RARAP10276 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RARAP10276 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
RARAP10276 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
RARAP10276 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
RARAP10276 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 FAM8A6P-201ENST00000407496 1135 ntBASIC18.74■□□□□ 0.59
RARAP10276 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RARAP10276 KRT18P48-201ENST00000434763 852 ntBASIC18.74■□□□□ 0.59
RARAP10276 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.74■□□□□ 0.59
RARAP10276 RN7SL850P-201ENST00000579959 291 ntBASIC18.74■□□□□ 0.59
RARAP10276 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.74■□□□□ 0.59
RARAP10276 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.74■□□□□ 0.59
RARAP10276 HYMAI.1-201ENST00000620949 238 ntBASIC18.74■□□□□ 0.59
RARAP10276 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.74■□□□□ 0.59
RARAP10276 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.74■□□□□ 0.59
RARAP10276 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.74■□□□□ 0.59
RARAP10276 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RARAP10276 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RARAP10276 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RARAP10276 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RARAP10276 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.73■□□□□ 0.59
RARAP10276 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.73■□□□□ 0.59
RARAP10276 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RARAP10276 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.73■□□□□ 0.59
RARAP10276 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RARAP10276 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 HBZP1-201ENST00000354915 429 ntBASIC18.73■□□□□ 0.59
RARAP10276 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.73■□□□□ 0.59
RARAP10276 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 AC112907.2-201ENST00000448639 330 ntBASIC18.73■□□□□ 0.59
RARAP10276 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.73■□□□□ 0.59
RARAP10276 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.73■□□□□ 0.59
RARAP10276 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.73■□□□□ 0.59
RARAP10276 AC004263.2-201ENST00000617183 678 ntBASIC18.73■□□□□ 0.59
RARAP10276 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RARAP10276 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.73■□□□□ 0.59
RARAP10276 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RARAP10276 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RARAP10276 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RARAP10276 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RARAP10276 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RARAP10276 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.72■□□□□ 0.59
RARAP10276 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RARAP10276 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RARAP10276 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RARAP10276 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RARAP10276 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms