Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 AC004817.3-201ENST00000602957 2129 ntBASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 KRT18P58-201ENST00000527480 1120 ntBASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 AC004408.2-201ENST00000623613 2777 ntBASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 REXO1L9P-201ENST00000604264 2108 ntBASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGHV4-38-2P0DP08 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 AC079776.2-201ENST00000641154 1609 ntBASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 ZNF259P1-201ENST00000407656 1365 ntBASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 COX5BP2-201ENST00000392354 334 ntBASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 AC098831.1-202ENST00000438821 336 ntBASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 AD001527.2-201ENST00000622994 785 ntBASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 AC104109.2-201ENST00000602919 1418 ntBASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-38-2P0DP08 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 IGHV3-22-201ENST00000520721 359 ntBASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.36□□□□□ -0.11
IGHV4-38-2P0DP08 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms