Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC172P0C7W6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC172P0C7W6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC172P0C7W6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC172P0C7W6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC172P0C7W6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC172P0C7W6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC172P0C7W6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.33■□□□□ 0.69
CCDC172P0C7W6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC172P0C7W6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC172P0C7W6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC172P0C7W6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC172P0C7W6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCDC172P0C7W6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
CCDC172P0C7W6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 AC145285.6-201ENST00000604632 637 ntBASIC19.33■□□□□ 0.68
CCDC172P0C7W6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 KRT89P-201ENST00000620027 1478 ntBASIC19.33■□□□□ 0.68
CCDC172P0C7W6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC172P0C7W6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 AC140113.3-201ENST00000605663 199 ntBASIC19.32■□□□□ 0.68
CCDC172P0C7W6 OR6D1P-203ENST00000641209 4860 ntBASIC19.32■□□□□ 0.68
CCDC172P0C7W6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
CCDC172P0C7W6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 AL596275.1-201ENST00000423464 877 ntBASIC19.31■□□□□ 0.68
CCDC172P0C7W6 LIN28AP1-201ENST00000429574 405 ntBASIC19.31■□□□□ 0.68
CCDC172P0C7W6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 AC093827.2-201ENST00000512654 315 ntBASIC19.31■□□□□ 0.68
CCDC172P0C7W6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 AL138966.2-201ENST00000621997 464 ntBASIC19.31■□□□□ 0.68
CCDC172P0C7W6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 LINC00167-201ENST00000530583 1419 ntBASIC19.31■□□□□ 0.68
CCDC172P0C7W6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC172P0C7W6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms