Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.84■□□□□ 0.45
COL4A2P08572 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.84■□□□□ 0.45
COL4A2P08572 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL4A2P08572 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.84■□□□□ 0.45
COL4A2P08572 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.84■□□□□ 0.45
COL4A2P08572 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL4A2P08572 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.83■□□□□ 0.45
COL4A2P08572 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL4A2P08572 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL4A2P08572 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.83■□□□□ 0.44
COL4A2P08572 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A2P08572 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A2P08572 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A2P08572 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.83■□□□□ 0.44
COL4A2P08572 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.83■□□□□ 0.44
COL4A2P08572 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.83■□□□□ 0.44
COL4A2P08572 AC011467.4-201ENST00000594891 528 ntBASIC17.83■□□□□ 0.44
COL4A2P08572 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.83■□□□□ 0.44
COL4A2P08572 AC106028.4-201ENST00000614509 607 ntBASIC17.83■□□□□ 0.44
COL4A2P08572 GGTLC5P-201ENST00000617623 998 ntBASIC17.83■□□□□ 0.44
COL4A2P08572 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
COL4A2P08572 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.83■□□□□ 0.44
COL4A2P08572 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A2P08572 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL4A2P08572 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.82■□□□□ 0.44
COL4A2P08572 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 BCAR1-209ENST00000546196 1340 ntBASIC17.82■□□□□ 0.44
COL4A2P08572 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.82■□□□□ 0.44
COL4A2P08572 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
COL4A2P08572 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.82■□□□□ 0.44
COL4A2P08572 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
COL4A2P08572 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.82■□□□□ 0.44
COL4A2P08572 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.82■□□□□ 0.44
COL4A2P08572 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
COL4A2P08572 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.82■□□□□ 0.44
COL4A2P08572 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL4A2P08572 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A2P08572 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.81■□□□□ 0.44
COL4A2P08572 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A2P08572 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COL4A2P08572 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A2P08572 AC022145.2-201ENST00000598203 171 ntBASIC17.81■□□□□ 0.44
COL4A2P08572 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A2P08572 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL4A2P08572 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL4A2P08572 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A2P08572 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A2P08572 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A2P08572 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COL4A2P08572 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
COL4A2P08572 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL4A2P08572 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL4A2P08572 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL4A2P08572 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COL4A2P08572 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.81■□□□□ 0.44
COL4A2P08572 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL4A2P08572 PTCHD3P3-201ENST00000403073 906 ntBASIC17.81■□□□□ 0.44
COL4A2P08572 AC096734.2-201ENST00000562054 433 ntBASIC17.81■□□□□ 0.44
COL4A2P08572 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A2P08572 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.81■□□□□ 0.44
COL4A2P08572 AC093512.1-201ENST00000617969 520 ntBASIC17.81■□□□□ 0.44
COL4A2P08572 AL513210.1-201ENST00000629608 234 ntBASIC17.81■□□□□ 0.44
COL4A2P08572 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A2P08572 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COL4A2P08572 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.8■□□□□ 0.44
COL4A2P08572 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.8■□□□□ 0.44
COL4A2P08572 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.8■□□□□ 0.44
COL4A2P08572 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.8■□□□□ 0.44
COL4A2P08572 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
COL4A2P08572 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL4A2P08572 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms