Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CTSDP07339 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.84□□□□□ -0.03
CTSDP07339 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.84□□□□□ -0.03
CTSDP07339 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CTSDP07339 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.84□□□□□ -0.03
CTSDP07339 SLC25A1P4-201ENST00000567977 778 ntBASIC14.84□□□□□ -0.03
CTSDP07339 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.84□□□□□ -0.03
CTSDP07339 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.84□□□□□ -0.03
CTSDP07339 AC073648.6-201ENST00000641589 218 ntBASIC14.84□□□□□ -0.03
CTSDP07339 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CTSDP07339 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CTSDP07339 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
CTSDP07339 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CTSDP07339 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
CTSDP07339 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.83□□□□□ -0.03
CTSDP07339 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.83□□□□□ -0.03
CTSDP07339 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.83□□□□□ -0.03
CTSDP07339 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CTSDP07339 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.83□□□□□ -0.04
CTSDP07339 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CTSDP07339 AC128676.1-201ENST00000454392 318 ntBASIC14.83□□□□□ -0.04
CTSDP07339 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.83□□□□□ -0.04
CTSDP07339 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.83□□□□□ -0.04
CTSDP07339 RARRES2P10-201ENST00000564312 460 ntBASIC14.83□□□□□ -0.04
CTSDP07339 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.83□□□□□ -0.04
CTSDP07339 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.83□□□□□ -0.04
CTSDP07339 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CTSDP07339 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CTSDP07339 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.83□□□□□ -0.04
CTSDP07339 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CTSDP07339 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTSDP07339 AC106886.4-201ENST00000623557 2502 ntBASIC14.83□□□□□ -0.04
CTSDP07339 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CTSDP07339 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.82□□□□□ -0.04
CTSDP07339 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.82□□□□□ -0.04
CTSDP07339 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.82□□□□□ -0.04
CTSDP07339 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.82□□□□□ -0.04
CTSDP07339 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
CTSDP07339 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.82□□□□□ -0.04
CTSDP07339 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 KRT18P29-201ENST00000397031 1267 ntBASIC14.82□□□□□ -0.04
CTSDP07339 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.82□□□□□ -0.04
CTSDP07339 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.82□□□□□ -0.04
CTSDP07339 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.82□□□□□ -0.04
CTSDP07339 AC104390.1-201ENST00000555663 520 ntBASIC14.82□□□□□ -0.04
CTSDP07339 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.82□□□□□ -0.04
CTSDP07339 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CTSDP07339 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CTSDP07339 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTSDP07339 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CTSDP07339 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.81□□□□□ -0.04
CTSDP07339 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
CTSDP07339 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTSDP07339 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms