Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.33■■□□□ 1.01
POLR3DP05423 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.33■■□□□ 1.01
POLR3DP05423 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
POLR3DP05423 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
POLR3DP05423 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.33■■□□□ 1
POLR3DP05423 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
POLR3DP05423 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.33■■□□□ 1
POLR3DP05423 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.33■■□□□ 1
POLR3DP05423 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
POLR3DP05423 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.33■■□□□ 1
POLR3DP05423 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.33■■□□□ 1
POLR3DP05423 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
POLR3DP05423 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3DP05423 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.32■■□□□ 1
POLR3DP05423 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.32■■□□□ 1
POLR3DP05423 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.32■■□□□ 1
POLR3DP05423 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.32■■□□□ 1
POLR3DP05423 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
POLR3DP05423 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.32■■□□□ 1
POLR3DP05423 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.32■■□□□ 1
POLR3DP05423 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.32■■□□□ 1
POLR3DP05423 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.32■■□□□ 1
POLR3DP05423 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.32■■□□□ 1
POLR3DP05423 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.32■■□□□ 1
POLR3DP05423 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
POLR3DP05423 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.32■■□□□ 1
POLR3DP05423 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.32■■□□□ 1
POLR3DP05423 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.32■■□□□ 1
POLR3DP05423 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.32■■□□□ 1
POLR3DP05423 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.32■■□□□ 1
POLR3DP05423 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.32■■□□□ 1
POLR3DP05423 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
POLR3DP05423 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
POLR3DP05423 AC005332.8-201ENST00000622750 2735 ntBASIC21.32■■□□□ 1
POLR3DP05423 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
POLR3DP05423 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.32■■□□□ 1
POLR3DP05423 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.32■■□□□ 1
POLR3DP05423 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.32■■□□□ 1
POLR3DP05423 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.31■■□□□ 1
POLR3DP05423 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3DP05423 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.31■■□□□ 1
POLR3DP05423 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3DP05423 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3DP05423 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
POLR3DP05423 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3DP05423 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3DP05423 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.31■■□□□ 1
POLR3DP05423 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3DP05423 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.31■■□□□ 1
POLR3DP05423 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.31■■□□□ 1
POLR3DP05423 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.31■■□□□ 1
POLR3DP05423 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.31■■□□□ 1
POLR3DP05423 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.31■■□□□ 1
POLR3DP05423 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.31■■□□□ 1
POLR3DP05423 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.31■■□□□ 1
POLR3DP05423 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
POLR3DP05423 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.31■■□□□ 1
POLR3DP05423 NOC2LP1-202ENST00000452600 2235 ntBASIC21.31■■□□□ 1
POLR3DP05423 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
POLR3DP05423 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.3■■□□□ 1
POLR3DP05423 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.3■■□□□ 1
POLR3DP05423 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.3■■□□□ 1
POLR3DP05423 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.3■■□□□ 1
POLR3DP05423 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.3■■□□□ 1
POLR3DP05423 AP002469.2-201ENST00000531724 424 ntBASIC21.3■■□□□ 1
POLR3DP05423 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.3■■□□□ 1
POLR3DP05423 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.3■■□□□ 1
POLR3DP05423 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.3■■□□□ 1
POLR3DP05423 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
POLR3DP05423 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.3■■□□□ 1
POLR3DP05423 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
POLR3DP05423 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.3■■□□□ 1
POLR3DP05423 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
POLR3DP05423 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3DP05423 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.29■■□□□ 1
POLR3DP05423 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR3DP05423 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.29■■□□□ 1
POLR3DP05423 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.29■■□□□ 1
POLR3DP05423 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.29■■□□□ 1
POLR3DP05423 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.29■■□□□ 1
POLR3DP05423 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.29■■□□□ 1
POLR3DP05423 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.29■■□□□ 1
POLR3DP05423 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
POLR3DP05423 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.29■■□□□ 1
POLR3DP05423 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.29■■□□□ 1
POLR3DP05423 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.29■■□□□ 1
POLR3DP05423 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms