Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC016734.2-201ENST00000624325 1377 ntBASIC16.67■□□□□ 0.26
TRIM3O75382 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM3O75382 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TRIM3O75382 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM3O75382 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TRIM3O75382 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 IGHGP-201ENST00000390555 1178 ntBASIC16.67■□□□□ 0.26
TRIM3O75382 TSPY22P-201ENST00000427496 604 ntBASIC16.67■□□□□ 0.26
TRIM3O75382 BX276092.5-203ENST00000456199 560 ntBASIC16.67■□□□□ 0.26
TRIM3O75382 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM3O75382 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM3O75382 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM3O75382 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.67■□□□□ 0.26
TRIM3O75382 AL390719.2-201ENST00000606993 987 ntBASIC16.67■□□□□ 0.26
TRIM3O75382 AL121672.3-201ENST00000608644 468 ntBASIC16.67■□□□□ 0.26
TRIM3O75382 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM3O75382 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM3O75382 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM3O75382 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM3O75382 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM3O75382 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 Z83836.1-201ENST00000624605 1642 ntBASIC16.67■□□□□ 0.26
TRIM3O75382 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM3O75382 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM3O75382 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM3O75382 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM3O75382 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 ATP5G2P1-201ENST00000433580 426 ntBASIC16.66■□□□□ 0.26
TRIM3O75382 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM3O75382 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
TRIM3O75382 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM3O75382 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.66■□□□□ 0.26
TRIM3O75382 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM3O75382 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 GPR32P1-201ENST00000601788 811 ntBASIC16.66■□□□□ 0.26
TRIM3O75382 NPAP1P7-201ENST00000613027 823 ntBASIC16.66■□□□□ 0.26
TRIM3O75382 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM3O75382 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM3O75382 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 TNRC18P3-201ENST00000441896 2691 ntBASIC16.66■□□□□ 0.26
TRIM3O75382 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TRIM3O75382 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM3O75382 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM3O75382 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM3O75382 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM3O75382 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM3O75382 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM3O75382 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM3O75382 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRIM3O75382 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRIM3O75382 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM3O75382 TSSC2-201ENST00000450217 709 ntBASIC16.65■□□□□ 0.26
TRIM3O75382 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM3O75382 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM3O75382 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.65■□□□□ 0.26
TRIM3O75382 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM3O75382 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM3O75382 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM3O75382 AL024508.2-201ENST00000607749 1894 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms