Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.09■□□□□ 0.17
PTP4A3O75365 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
PTP4A3O75365 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PTP4A3O75365 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.09■□□□□ 0.17
PTP4A3O75365 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.09■□□□□ 0.17
PTP4A3O75365 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PTP4A3O75365 AL023973.1-201ENST00000624619 620 ntBASIC16.09■□□□□ 0.17
PTP4A3O75365 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PTP4A3O75365 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.09■□□□□ 0.17
PTP4A3O75365 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PTP4A3O75365 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.09■□□□□ 0.17
PTP4A3O75365 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.09■□□□□ 0.17
PTP4A3O75365 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTP4A3O75365 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PTP4A3O75365 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTP4A3O75365 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTP4A3O75365 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PTP4A3O75365 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PTP4A3O75365 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTP4A3O75365 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.08■□□□□ 0.17
PTP4A3O75365 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PTP4A3O75365 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTP4A3O75365 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.08■□□□□ 0.17
PTP4A3O75365 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTP4A3O75365 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PTP4A3O75365 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTP4A3O75365 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.17
PTP4A3O75365 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.08■□□□□ 0.16
PTP4A3O75365 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
PTP4A3O75365 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 AC087499.1-201ENST00000418141 1075 ntBASIC16.08■□□□□ 0.16
PTP4A3O75365 HLA-F-220ENST00000434407 884 ntBASIC16.08■□□□□ 0.16
PTP4A3O75365 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.08■□□□□ 0.16
PTP4A3O75365 AL136038.4-201ENST00000603606 1261 ntBASIC16.08■□□□□ 0.16
PTP4A3O75365 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.08■□□□□ 0.16
PTP4A3O75365 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PTP4A3O75365 AL031432.5-201ENST00000641059 760 ntBASIC16.08■□□□□ 0.16
PTP4A3O75365 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PTP4A3O75365 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.08■□□□□ 0.16
PTP4A3O75365 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.08■□□□□ 0.16
PTP4A3O75365 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.08■□□□□ 0.16
PTP4A3O75365 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.08■□□□□ 0.16
PTP4A3O75365 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A3O75365 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.08■□□□□ 0.16
PTP4A3O75365 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.08■□□□□ 0.16
PTP4A3O75365 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A3O75365 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.07■□□□□ 0.16
PTP4A3O75365 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.07■□□□□ 0.16
PTP4A3O75365 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A3O75365 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PTP4A3O75365 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.07■□□□□ 0.16
PTP4A3O75365 SLC25A3P1-201ENST00000443844 931 ntBASIC16.07■□□□□ 0.16
PTP4A3O75365 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A3O75365 AL441883.1-201ENST00000566170 1045 ntBASIC16.07■□□□□ 0.16
PTP4A3O75365 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PTP4A3O75365 AC009154.2-201ENST00000621177 724 ntBASIC16.07■□□□□ 0.16
PTP4A3O75365 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A3O75365 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PTP4A3O75365 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTP4A3O75365 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.07■□□□□ 0.16
PTP4A3O75365 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms