Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT3O75175 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 TSPY22P-201ENST00000427496 604 ntBASIC17.34■□□□□ 0.37
CNOT3O75175 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.34■□□□□ 0.37
CNOT3O75175 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT3O75175 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.34■□□□□ 0.37
CNOT3O75175 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNOT3O75175 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNOT3O75175 AC067852.2-201ENST00000590513 2313 ntBASIC17.34■□□□□ 0.37
CNOT3O75175 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.34■□□□□ 0.37
CNOT3O75175 AC046158.3-201ENST00000624947 2558 ntBASIC17.34■□□□□ 0.37
CNOT3O75175 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT3O75175 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT3O75175 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.34■□□□□ 0.37
CNOT3O75175 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CNOT3O75175 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNOT3O75175 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT3O75175 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT3O75175 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT3O75175 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT3O75175 ABALON-201ENST00000629058 1903 ntBASIC17.33■□□□□ 0.37
CNOT3O75175 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT3O75175 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT3O75175 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CNOT3O75175 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.33■□□□□ 0.37
CNOT3O75175 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNOT3O75175 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.33■□□□□ 0.36
CNOT3O75175 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CNOT3O75175 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.33■□□□□ 0.36
CNOT3O75175 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CNOT3O75175 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.33■□□□□ 0.36
CNOT3O75175 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.33■□□□□ 0.36
CNOT3O75175 KRT18P41-201ENST00000518924 1277 ntBASIC17.33■□□□□ 0.36
CNOT3O75175 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CNOT3O75175 AP002414.4-201ENST00000589764 1148 ntBASIC17.33■□□□□ 0.36
CNOT3O75175 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CNOT3O75175 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.33■□□□□ 0.36
CNOT3O75175 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.33■□□□□ 0.36
CNOT3O75175 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.33■□□□□ 0.36
CNOT3O75175 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.33■□□□□ 0.36
CNOT3O75175 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CNOT3O75175 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CNOT3O75175 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CNOT3O75175 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT3O75175 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CNOT3O75175 Z83836.1-201ENST00000624605 1642 ntBASIC17.32■□□□□ 0.36
CNOT3O75175 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CNOT3O75175 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CNOT3O75175 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT3O75175 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT3O75175 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.32■□□□□ 0.36
CNOT3O75175 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.32■□□□□ 0.36
CNOT3O75175 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.32■□□□□ 0.36
CNOT3O75175 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT3O75175 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
CNOT3O75175 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.32■□□□□ 0.36
CNOT3O75175 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.32■□□□□ 0.36
CNOT3O75175 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT3O75175 AC005332.3-201ENST00000589904 676 ntBASIC17.32■□□□□ 0.36
CNOT3O75175 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.32■□□□□ 0.36
CNOT3O75175 AC092329.2-201ENST00000598402 547 ntBASIC17.32■□□□□ 0.36
CNOT3O75175 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT3O75175 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT3O75175 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT3O75175 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 AL391005.1-201ENST00000623953 2435 ntBASIC17.32■□□□□ 0.36
CNOT3O75175 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms