Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CPNE3O75131 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE3O75131 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE3O75131 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CPNE3O75131 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE3O75131 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE3O75131 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CPNE3O75131 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CPNE3O75131 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CPNE3O75131 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CPNE3O75131 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.14■□□□□ 0.33
CPNE3O75131 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CPNE3O75131 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE3O75131 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.14■□□□□ 0.33
CPNE3O75131 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.14■□□□□ 0.33
CPNE3O75131 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CPNE3O75131 AC114341.1-201ENST00000618070 349 ntBASIC17.14■□□□□ 0.33
CPNE3O75131 REXO1L6P-202ENST00000619970 1078 ntBASIC17.14■□□□□ 0.33
CPNE3O75131 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CPNE3O75131 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE3O75131 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE3O75131 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE3O75131 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE3O75131 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
CPNE3O75131 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
CPNE3O75131 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE3O75131 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 LINC00602-201ENST00000629776 2065 ntBASIC17.13■□□□□ 0.33
CPNE3O75131 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.13■□□□□ 0.33
CPNE3O75131 AC009078.2-202ENST00000463353 338 ntBASIC17.13■□□□□ 0.33
CPNE3O75131 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.13■□□□□ 0.33
CPNE3O75131 AC068472.1-201ENST00000474589 881 ntBASIC17.13■□□□□ 0.33
CPNE3O75131 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE3O75131 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE3O75131 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.13■□□□□ 0.33
CPNE3O75131 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CPNE3O75131 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.13■□□□□ 0.33
CPNE3O75131 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE3O75131 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE3O75131 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE3O75131 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE3O75131 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CPNE3O75131 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CPNE3O75131 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
CPNE3O75131 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 AKR1C7P-201ENST00000305623 895 ntBASIC17.12■□□□□ 0.33
CPNE3O75131 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 AP002469.2-201ENST00000531724 424 ntBASIC17.12■□□□□ 0.33
CPNE3O75131 AL662844.1-201ENST00000546340 181 ntBASIC17.12■□□□□ 0.33
CPNE3O75131 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CPNE3O75131 AL591684.3-201ENST00000605187 298 ntBASIC17.12■□□□□ 0.33
CPNE3O75131 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE3O75131 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms