Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXD2O60548 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.96■□□□□ 0.47
FOXD2O60548 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXD2O60548 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
FOXD2O60548 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXD2O60548 AC092910.1-201ENST00000482027 1129 ntBASIC17.96■□□□□ 0.47
FOXD2O60548 RNA5SP415-201ENST00000517246 115 ntBASIC17.96■□□□□ 0.47
FOXD2O60548 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.96■□□□□ 0.47
FOXD2O60548 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.96■□□□□ 0.47
FOXD2O60548 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.96■□□□□ 0.47
FOXD2O60548 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
FOXD2O60548 AC021087.4-201ENST00000563761 564 ntBASIC17.96■□□□□ 0.47
FOXD2O60548 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 AC092364.2-202ENST00000597012 1073 ntBASIC17.96■□□□□ 0.47
FOXD2O60548 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXD2O60548 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
FOXD2O60548 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXD2O60548 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXD2O60548 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXD2O60548 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXD2O60548 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
FOXD2O60548 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
FOXD2O60548 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
FOXD2O60548 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.96■□□□□ 0.46
FOXD2O60548 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXD2O60548 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXD2O60548 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
FOXD2O60548 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXD2O60548 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
FOXD2O60548 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXD2O60548 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 AC138932.1-201ENST00000534164 6830 ntBASIC17.95■□□□□ 0.46
FOXD2O60548 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXD2O60548 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
FOXD2O60548 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXD2O60548 AC008735.5-201ENST00000623544 497 ntBASIC17.95■□□□□ 0.46
FOXD2O60548 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXD2O60548 AP005117.1-201ENST00000584346 1413 ntBASIC17.95■□□□□ 0.46
FOXD2O60548 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXD2O60548 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXD2O60548 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.94■□□□□ 0.46
FOXD2O60548 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.94■□□□□ 0.46
FOXD2O60548 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXD2O60548 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 AC113404.2-201ENST00000507884 177 ntBASIC17.94■□□□□ 0.46
FOXD2O60548 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXD2O60548 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
FOXD2O60548 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXD2O60548 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXD2O60548 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXD2O60548 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXD2O60548 AL139288.1-201ENST00000623748 933 ntBASIC17.94■□□□□ 0.46
FOXD2O60548 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
FOXD2O60548 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
FOXD2O60548 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXD2O60548 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXD2O60548 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
FOXD2O60548 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXD2O60548 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
FOXD2O60548 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXD2O60548 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXD2O60548 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXD2O60548 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
FOXD2O60548 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXD2O60548 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms