Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 MIR4674-201ENST00000582457 87 ntBASIC16.44■□□□□ 0.22
IDH3BO43837 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.44■□□□□ 0.22
IDH3BO43837 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
IDH3BO43837 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.44■□□□□ 0.22
IDH3BO43837 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IDH3BO43837 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
IDH3BO43837 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.43■□□□□ 0.22
IDH3BO43837 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.43■□□□□ 0.22
IDH3BO43837 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.43■□□□□ 0.22
IDH3BO43837 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.43■□□□□ 0.22
IDH3BO43837 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
IDH3BO43837 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.43■□□□□ 0.22
IDH3BO43837 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.43■□□□□ 0.22
IDH3BO43837 AL158047.1-201ENST00000445918 881 ntBASIC16.43■□□□□ 0.22
IDH3BO43837 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.43■□□□□ 0.22
IDH3BO43837 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.43■□□□□ 0.22
IDH3BO43837 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.43■□□□□ 0.22
IDH3BO43837 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.43■□□□□ 0.22
IDH3BO43837 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.43■□□□□ 0.22
IDH3BO43837 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.43■□□□□ 0.22
IDH3BO43837 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.43■□□□□ 0.22
IDH3BO43837 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 NKILA-202ENST00000614771 2598 ntBASIC16.43■□□□□ 0.22
IDH3BO43837 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
IDH3BO43837 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.43■□□□□ 0.22
IDH3BO43837 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IDH3BO43837 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.43■□□□□ 0.22
IDH3BO43837 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.43■□□□□ 0.22
IDH3BO43837 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
IDH3BO43837 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.43■□□□□ 0.22
IDH3BO43837 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
IDH3BO43837 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
IDH3BO43837 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.42■□□□□ 0.22
IDH3BO43837 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.42■□□□□ 0.22
IDH3BO43837 CCR12P-201ENST00000446203 998 ntBASIC16.42■□□□□ 0.22
IDH3BO43837 AC098590.1-201ENST00000468126 897 ntBASIC16.42■□□□□ 0.22
IDH3BO43837 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
IDH3BO43837 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.42■□□□□ 0.22
IDH3BO43837 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.42■□□□□ 0.22
IDH3BO43837 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.42■□□□□ 0.22
IDH3BO43837 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
IDH3BO43837 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IDH3BO43837 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.42■□□□□ 0.22
IDH3BO43837 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.42■□□□□ 0.22
IDH3BO43837 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.42■□□□□ 0.22
IDH3BO43837 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IDH3BO43837 AC011676.5-201ENST00000624864 2660 ntBASIC16.42■□□□□ 0.22
IDH3BO43837 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
IDH3BO43837 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IDH3BO43837 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.41■□□□□ 0.22
IDH3BO43837 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.41■□□□□ 0.22
IDH3BO43837 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
IDH3BO43837 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IDH3BO43837 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
IDH3BO43837 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IDH3BO43837 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms