Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC005332.8-201ENST00000622750 2735 ntBASIC15.92■□□□□ 0.14
TRAF3IP2O43734 AC009949.1-201ENST00000623048 1830 ntBASIC15.92■□□□□ 0.14
TRAF3IP2O43734 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 RN7SL606P-201ENST00000472779 293 ntBASIC15.92■□□□□ 0.14
TRAF3IP2O43734 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 AL592071.1-201ENST00000611956 408 ntBASIC15.92■□□□□ 0.14
TRAF3IP2O43734 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRAF3IP2O43734 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 PCED1CP-201ENST00000419887 785 ntBASIC15.91■□□□□ 0.14
TRAF3IP2O43734 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 GUSBP12-201ENST00000513727 720 ntBASIC15.91■□□□□ 0.14
TRAF3IP2O43734 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 AL445228.2-201ENST00000605589 952 ntBASIC15.91■□□□□ 0.14
TRAF3IP2O43734 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 AC116407.2-201ENST00000613639 860 ntBASIC15.91■□□□□ 0.14
TRAF3IP2O43734 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAF3IP2O43734 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 DDX43P3-201ENST00000441064 443 ntBASIC15.9■□□□□ 0.14
TRAF3IP2O43734 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 AC090616.6-201ENST00000582640 721 ntBASIC15.9■□□□□ 0.14
TRAF3IP2O43734 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 PCDHB18P-201ENST00000524813 2368 ntBASIC15.9■□□□□ 0.14
TRAF3IP2O43734 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP2O43734 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 IER3-202ENST00000376377 1350 ntBASIC15.89■□□□□ 0.13
TRAF3IP2O43734 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms