Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RIPK2O43353 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.14■□□□□ 0.49
RIPK2O43353 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RIPK2O43353 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.13■□□□□ 0.49
RIPK2O43353 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RIPK2O43353 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.13■□□□□ 0.49
RIPK2O43353 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RIPK2O43353 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RIPK2O43353 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.13■□□□□ 0.49
RIPK2O43353 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.13■□□□□ 0.49
RIPK2O43353 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.13■□□□□ 0.49
RIPK2O43353 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.13■□□□□ 0.49
RIPK2O43353 AL353719.1-201ENST00000566847 864 ntBASIC18.13■□□□□ 0.49
RIPK2O43353 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.13■□□□□ 0.49
RIPK2O43353 AC116407.2-201ENST00000613639 860 ntBASIC18.13■□□□□ 0.49
RIPK2O43353 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RIPK2O43353 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.13■□□□□ 0.49
RIPK2O43353 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
RIPK2O43353 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RIPK2O43353 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.13■□□□□ 0.49
RIPK2O43353 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
RIPK2O43353 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.13■□□□□ 0.49
RIPK2O43353 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIPK2O43353 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RIPK2O43353 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIPK2O43353 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.12■□□□□ 0.49
RIPK2O43353 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIPK2O43353 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
RIPK2O43353 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RIPK2O43353 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RIPK2O43353 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RIPK2O43353 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RIPK2O43353 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.12■□□□□ 0.49
RIPK2O43353 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIPK2O43353 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.12■□□□□ 0.49
RIPK2O43353 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.12■□□□□ 0.49
RIPK2O43353 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RIPK2O43353 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIPK2O43353 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.12■□□□□ 0.49
RIPK2O43353 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.12■□□□□ 0.49
RIPK2O43353 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.12■□□□□ 0.49
RIPK2O43353 REXO1L10P-201ENST00000615707 1290 ntBASIC18.12■□□□□ 0.49
RIPK2O43353 REXO1L12P-201ENST00000622156 912 ntBASIC18.12■□□□□ 0.49
RIPK2O43353 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.12■□□□□ 0.49
RIPK2O43353 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RIPK2O43353 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.12■□□□□ 0.49
RIPK2O43353 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RIPK2O43353 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.12■□□□□ 0.49
RIPK2O43353 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RIPK2O43353 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.12■□□□□ 0.49
RIPK2O43353 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RIPK2O43353 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIPK2O43353 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIPK2O43353 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RIPK2O43353 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.11■□□□□ 0.49
RIPK2O43353 AP005242.2-201ENST00000580065 1175 ntBASIC18.11■□□□□ 0.49
RIPK2O43353 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.11■□□□□ 0.49
RIPK2O43353 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.11■□□□□ 0.49
RIPK2O43353 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RIPK2O43353 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RIPK2O43353 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RIPK2O43353 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RIPK2O43353 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIPK2O43353 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms