Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
TO15178 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TO15178 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TO15178 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.45■□□□□ 0.22
TO15178 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.45■□□□□ 0.22
TO15178 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.45■□□□□ 0.22
TO15178 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.45■□□□□ 0.22
TO15178 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TO15178 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.45■□□□□ 0.22
TO15178 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.44■□□□□ 0.22
TO15178 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TO15178 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TO15178 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TO15178 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.44■□□□□ 0.22
TO15178 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.44■□□□□ 0.22
TO15178 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.44■□□□□ 0.22
TO15178 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TO15178 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.44■□□□□ 0.22
TO15178 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.44■□□□□ 0.22
TO15178 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.44■□□□□ 0.22
TO15178 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TO15178 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.44■□□□□ 0.22
TO15178 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.44■□□□□ 0.22
TO15178 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 NOC2LP2-201ENST00000407594 1944 ntBASIC16.44■□□□□ 0.22
TO15178 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.44■□□□□ 0.22
TO15178 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TO15178 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TO15178 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.44■□□□□ 0.22
TO15178 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.44■□□□□ 0.22
TO15178 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TO15178 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.43■□□□□ 0.22
TO15178 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.43■□□□□ 0.22
TO15178 AC006116.8-202ENST00000587620 1550 ntBASIC16.43■□□□□ 0.22
TO15178 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TO15178 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.43■□□□□ 0.22
TO15178 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.43■□□□□ 0.22
TO15178 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.43■□□□□ 0.22
TO15178 AC009533.2-201ENST00000543664 586 ntBASIC16.43■□□□□ 0.22
TO15178 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.43■□□□□ 0.22
TO15178 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TO15178 AC007613.1-201ENST00000572811 2597 ntBASIC16.43■□□□□ 0.22
TO15178 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TO15178 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TO15178 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.42■□□□□ 0.22
TO15178 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TO15178 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.42■□□□□ 0.22
TO15178 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TO15178 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.42■□□□□ 0.22
TO15178 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.42■□□□□ 0.22
TO15178 NSUN5P1-202ENST00000421140 1535 ntBASIC16.42■□□□□ 0.22
TO15178 NSUN5P2-203ENST00000457352 1529 ntBASIC16.42■□□□□ 0.22
TO15178 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TO15178 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.42■□□□□ 0.22
TO15178 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TO15178 HCG4P8-203ENST00000443049 980 ntBASIC16.42■□□□□ 0.22
TO15178 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.42■□□□□ 0.22
TO15178 AC104819.1-201ENST00000504587 486 ntBASIC16.42■□□□□ 0.22
TO15178 AP000867.3-201ENST00000524675 377 ntBASIC16.42■□□□□ 0.22
TO15178 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.42■□□□□ 0.22
TO15178 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.42■□□□□ 0.22
TO15178 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.42■□□□□ 0.22
TO15178 AC090340.1-201ENST00000620778 4980 ntBASIC16.42■□□□□ 0.22
TO15178 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TO15178 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms