Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CAPN9O14815 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.87■□□□□ 0.61
CAPN9O14815 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.87■□□□□ 0.61
CAPN9O14815 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.87■□□□□ 0.61
CAPN9O14815 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.87■□□□□ 0.61
CAPN9O14815 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CAPN9O14815 AC016734.2-201ENST00000624325 1377 ntBASIC18.87■□□□□ 0.61
CAPN9O14815 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN9O14815 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN9O14815 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN9O14815 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN9O14815 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN9O14815 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN9O14815 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.86■□□□□ 0.61
CAPN9O14815 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN9O14815 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN9O14815 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
CAPN9O14815 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN9O14815 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CAPN9O14815 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN9O14815 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CAPN9O14815 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CAPN9O14815 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 AC022898.2-201ENST00000616822 1312 ntBASIC18.86■□□□□ 0.61
CAPN9O14815 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CAPN9O14815 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 AC124864.1-201ENST00000623408 392 ntBASIC18.86■□□□□ 0.61
CAPN9O14815 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN9O14815 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CAPN9O14815 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CAPN9O14815 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN9O14815 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN9O14815 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN9O14815 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CAPN9O14815 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CAPN9O14815 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CAPN9O14815 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN9O14815 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CAPN9O14815 KRT18P1-202ENST00000452408 1331 ntBASIC18.85■□□□□ 0.61
CAPN9O14815 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CAPN9O14815 KRT126P-201ENST00000549467 1181 ntBASIC18.85■□□□□ 0.61
CAPN9O14815 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CAPN9O14815 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.85■□□□□ 0.61
CAPN9O14815 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.85■□□□□ 0.61
CAPN9O14815 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CAPN9O14815 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CAPN9O14815 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.84■□□□□ 0.61
CAPN9O14815 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.84■□□□□ 0.61
CAPN9O14815 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.84■□□□□ 0.61
CAPN9O14815 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.84■□□□□ 0.61
CAPN9O14815 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.84■□□□□ 0.61
CAPN9O14815 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.84■□□□□ 0.61
CAPN9O14815 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CAPN9O14815 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.84■□□□□ 0.61
CAPN9O14815 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CAPN9O14815 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CAPN9O14815 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.84■□□□□ 0.61
CAPN9O14815 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN9O14815 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms