Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHDO14521 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDHDO14521 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHDO14521 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHDO14521 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHDO14521 KRT8P47-201ENST00000604727 1398 ntBASIC17.25■□□□□ 0.35
SDHDO14521 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDHDO14521 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHDO14521 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDHDO14521 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHDO14521 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SDHDO14521 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SDHDO14521 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
SDHDO14521 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHDO14521 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
SDHDO14521 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHDO14521 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHDO14521 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SDHDO14521 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.24■□□□□ 0.35
SDHDO14521 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.24■□□□□ 0.35
SDHDO14521 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.24■□□□□ 0.35
SDHDO14521 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHDO14521 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHDO14521 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.24■□□□□ 0.35
SDHDO14521 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.24■□□□□ 0.35
SDHDO14521 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.24■□□□□ 0.35
SDHDO14521 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SDHDO14521 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHDO14521 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.24■□□□□ 0.35
SDHDO14521 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHDO14521 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHDO14521 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SDHDO14521 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHDO14521 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.23■□□□□ 0.35
SDHDO14521 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.23■□□□□ 0.35
SDHDO14521 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
SDHDO14521 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.23■□□□□ 0.35
SDHDO14521 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SDHDO14521 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SDHDO14521 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 TSPY14P-201ENST00000303979 915 ntBASIC17.23■□□□□ 0.35
SDHDO14521 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.23■□□□□ 0.35
SDHDO14521 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.23■□□□□ 0.35
SDHDO14521 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.23■□□□□ 0.35
SDHDO14521 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.23■□□□□ 0.35
SDHDO14521 MIR1238-201ENST00000408483 83 ntBASIC17.23■□□□□ 0.35
SDHDO14521 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SDHDO14521 C2orf69P3-201ENST00000565542 1120 ntBASIC17.23■□□□□ 0.35
SDHDO14521 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 AC106886.4-201ENST00000623557 2502 ntBASIC17.23■□□□□ 0.35
SDHDO14521 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SDHDO14521 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDHDO14521 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDHDO14521 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SDHDO14521 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHDO14521 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHDO14521 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDHDO14521 OR6D1P-202ENST00000641007 5290 ntBASIC17.22■□□□□ 0.35
SDHDO14521 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHDO14521 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SDHDO14521 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHDO14521 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SDHDO14521 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SDHDO14521 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.22■□□□□ 0.35
SDHDO14521 PVRIG2P-201ENST00000435460 978 ntBASIC17.22■□□□□ 0.35
SDHDO14521 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.22■□□□□ 0.35
SDHDO14521 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SDHDO14521 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SDHDO14521 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SDHDO14521 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.22■□□□□ 0.35
SDHDO14521 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.22■□□□□ 0.35
SDHDO14521 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.22■□□□□ 0.35
SDHDO14521 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SDHDO14521 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms