Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.05■□□□□ 0.32
RTCAO00442 AC068472.1-201ENST00000474589 881 ntBASIC17.05■□□□□ 0.32
RTCAO00442 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.05■□□□□ 0.32
RTCAO00442 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.05■□□□□ 0.32
RTCAO00442 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.05■□□□□ 0.32
RTCAO00442 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.05■□□□□ 0.32
RTCAO00442 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.05■□□□□ 0.32
RTCAO00442 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.05■□□□□ 0.32
RTCAO00442 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.05■□□□□ 0.32
RTCAO00442 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RTCAO00442 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.05■□□□□ 0.32
RTCAO00442 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 AC009949.1-201ENST00000623048 1830 ntBASIC17.05■□□□□ 0.32
RTCAO00442 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTCAO00442 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RTCAO00442 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.04■□□□□ 0.32
RTCAO00442 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.04■□□□□ 0.32
RTCAO00442 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
RTCAO00442 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.04■□□□□ 0.32
RTCAO00442 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RTCAO00442 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.04■□□□□ 0.32
RTCAO00442 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.04■□□□□ 0.32
RTCAO00442 AC112698.1-201ENST00000510299 916 ntBASIC17.04■□□□□ 0.32
RTCAO00442 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.04■□□□□ 0.32
RTCAO00442 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.04■□□□□ 0.32
RTCAO00442 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RTCAO00442 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.04■□□□□ 0.32
RTCAO00442 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.04■□□□□ 0.32
RTCAO00442 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RTCAO00442 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RTCAO00442 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.04■□□□□ 0.32
RTCAO00442 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.04■□□□□ 0.32
RTCAO00442 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.04■□□□□ 0.32
RTCAO00442 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTCAO00442 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.03■□□□□ 0.32
RTCAO00442 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.03■□□□□ 0.32
RTCAO00442 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.03■□□□□ 0.32
RTCAO00442 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.03■□□□□ 0.32
RTCAO00442 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.03■□□□□ 0.32
RTCAO00442 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.03■□□□□ 0.32
RTCAO00442 ARMC10P1-201ENST00000313754 855 ntBASIC17.03■□□□□ 0.32
RTCAO00442 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 PCED1CP-201ENST00000419887 785 ntBASIC17.03■□□□□ 0.32
RTCAO00442 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 MTCL1P1-201ENST00000446207 792 ntBASIC17.03■□□□□ 0.32
RTCAO00442 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RTCAO00442 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.03■□□□□ 0.32
RTCAO00442 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RTCAO00442 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.03■□□□□ 0.32
RTCAO00442 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTCAO00442 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.03■□□□□ 0.32
RTCAO00442 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTCAO00442 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.02■□□□□ 0.32
RTCAO00442 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.02■□□□□ 0.32
RTCAO00442 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RTCAO00442 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTCAO00442 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.02■□□□□ 0.32
RTCAO00442 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTCAO00442 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms