Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 HLA-J-201ENST00000462773 1622 ntBASIC16.54■□□□□ 0.24
TNFRSF11BO00300 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFRSF11BO00300 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 AL353719.1-201ENST00000566847 864 ntBASIC16.53■□□□□ 0.24
TNFRSF11BO00300 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 AL023803.3-201ENST00000615559 522 ntBASIC16.53■□□□□ 0.24
TNFRSF11BO00300 REXO1L10P-201ENST00000615707 1290 ntBASIC16.53■□□□□ 0.24
TNFRSF11BO00300 REXO1L12P-201ENST00000622156 912 ntBASIC16.53■□□□□ 0.24
TNFRSF11BO00300 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 TNRC18P3-201ENST00000441896 2691 ntBASIC16.53■□□□□ 0.24
TNFRSF11BO00300 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFRSF11BO00300 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 TSPY17P-201ENST00000450329 467 ntBASIC16.52■□□□□ 0.24
TNFRSF11BO00300 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 AP005242.2-201ENST00000580065 1175 ntBASIC16.52■□□□□ 0.24
TNFRSF11BO00300 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 AC010240.3-201ENST00000607688 395 ntBASIC16.52■□□□□ 0.24
TNFRSF11BO00300 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFRSF11BO00300 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNFRSF11BO00300 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFRSF11BO00300 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms