Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TAF4O00268 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TAF4O00268 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TAF4O00268 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.5■□□□□ 0.39
TAF4O00268 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TAF4O00268 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.5■□□□□ 0.39
TAF4O00268 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.5■□□□□ 0.39
TAF4O00268 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.5■□□□□ 0.39
TAF4O00268 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.5■□□□□ 0.39
TAF4O00268 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.5■□□□□ 0.39
TAF4O00268 AC034105.1-201ENST00000563488 319 ntBASIC17.5■□□□□ 0.39
TAF4O00268 BNIP3P18-201ENST00000593976 575 ntBASIC17.5■□□□□ 0.39
TAF4O00268 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.5■□□□□ 0.39
TAF4O00268 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TAF4O00268 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TAF4O00268 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.5■□□□□ 0.39
TAF4O00268 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TAF4O00268 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TAF4O00268 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TAF4O00268 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 KRT18P28-201ENST00000453838 1332 ntBASIC17.49■□□□□ 0.39
TAF4O00268 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TAF4O00268 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.49■□□□□ 0.39
TAF4O00268 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.49■□□□□ 0.39
TAF4O00268 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TAF4O00268 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.49■□□□□ 0.39
TAF4O00268 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TAF4O00268 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.49■□□□□ 0.39
TAF4O00268 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 IGHGP-201ENST00000390555 1178 ntBASIC17.49■□□□□ 0.39
TAF4O00268 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.49■□□□□ 0.39
TAF4O00268 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.49■□□□□ 0.39
TAF4O00268 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.49■□□□□ 0.39
TAF4O00268 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
TAF4O00268 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.49■□□□□ 0.39
TAF4O00268 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TAF4O00268 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.49■□□□□ 0.39
TAF4O00268 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TAF4O00268 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.48■□□□□ 0.39
TAF4O00268 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TAF4O00268 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TAF4O00268 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.48■□□□□ 0.39
TAF4O00268 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.48■□□□□ 0.39
TAF4O00268 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.48■□□□□ 0.39
TAF4O00268 KRT18P3-201ENST00000451602 1288 ntBASIC17.48■□□□□ 0.39
TAF4O00268 CYMP-203ENST00000474680 1263 ntBASIC17.48■□□□□ 0.39
TAF4O00268 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.48■□□□□ 0.39
TAF4O00268 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms