Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 DUSP5P2-201ENST00000426873 1033 ntBASIC12.72□□□□□ -0.37
LINC01549A6NIU2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 PNMA6B-201ENST00000538162 1200 ntBASIC12.72□□□□□ -0.37
LINC01549A6NIU2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 AC008687.6-201ENST00000596318 630 ntBASIC12.72□□□□□ -0.37
LINC01549A6NIU2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 AC092118.2-201ENST00000613495 667 ntBASIC12.72□□□□□ -0.37
LINC01549A6NIU2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 KRT8P50-201ENST00000562022 1438 ntBASIC12.71□□□□□ -0.37
LINC01549A6NIU2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.71□□□□□ -0.37
LINC01549A6NIU2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.71□□□□□ -0.37
LINC01549A6NIU2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 AC105036.2-201ENST00000569468 176 ntBASIC12.71□□□□□ -0.37
LINC01549A6NIU2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 AC008741.2-201ENST00000612792 3115 ntBASIC12.71□□□□□ -0.37
LINC01549A6NIU2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01549A6NIU2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 AL163051.1-201ENST00000569214 1512 ntBASIC12.71□□□□□ -0.38
LINC01549A6NIU2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms