Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 AC093503.3-201ENST00000624917 2352 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 AL096828.2-201ENST00000567259 1965 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 AC010460.3-201ENST00000511359 1579 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 AC090340.1-201ENST00000620778 4980 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 MIR574-201ENST00000385209 96 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 PMS2P1-201ENST00000431037 1228 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 RPL13AP23-201ENST00000480739 586 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 DUTP2-201ENST00000519164 463 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 OR7E14P-202ENST00000530490 1290 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 NKAPP1-205ENST00000585790 367 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 AL139288.1-201ENST00000623748 933 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 AC116407.3-201ENST00000623905 1129 ntBASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 AP000867.4-201ENST00000641616 219 ntBASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 KRT8P47-201ENST00000604727 1398 ntBASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TBC1D3FA6NER0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 MTDHP4-201ENST00000600287 670 ntBASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 AL671883.3-201ENST00000603274 991 ntBASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 AC023511.2-201ENST00000618803 211 ntBASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms