Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 AC079776.2-201ENST00000641154 1609 ntBASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 PMPCAP1-201ENST00000508114 1576 ntBASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.08■□□□□ 0.49
TBC1D3BA6NDS4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 AC103564.2-201ENST00000432853 1299 ntBASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 AC145285.3-201ENST00000564603 959 ntBASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 AC027601.4-201ENST00000611259 610 ntBASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 AC139530.3-201ENST00000620344 690 ntBASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 AL022326.1-202ENST00000641533 845 ntBASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TBC1D3BA6NDS4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 RNA5SP415-201ENST00000517246 115 ntBASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 AD001527.2-201ENST00000622994 785 ntBASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 AL096828.2-201ENST00000567259 1965 ntBASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 AC018445.3-201ENST00000624177 1945 ntBASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TBC1D3BA6NDS4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 COX5BP2-201ENST00000392354 334 ntBASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 LAGE3P1-201ENST00000425356 484 ntBASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 AC004817.3-201ENST00000602957 2129 ntBASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 WIZP1-201ENST00000531444 2299 ntBASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TBC1D3BA6NDS4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms