Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
HFM1A2PYH4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HFM1A2PYH4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
HFM1A2PYH4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HFM1A2PYH4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC26.28■■□□□ 1.8
HFM1A2PYH4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HFM1A2PYH4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC26.28■■□□□ 1.8
HFM1A2PYH4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC26.28■■□□□ 1.8
HFM1A2PYH4 BX005266.1-201ENST00000473402 457 ntBASIC26.28■■□□□ 1.8
HFM1A2PYH4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC26.28■■□□□ 1.8
HFM1A2PYH4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC26.28■■□□□ 1.8
HFM1A2PYH4 MTDHP4-201ENST00000600287 670 ntBASIC26.28■■□□□ 1.8
HFM1A2PYH4 AC064862.7-201ENST00000604520 867 ntBASIC26.28■■□□□ 1.8
HFM1A2PYH4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HFM1A2PYH4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HFM1A2PYH4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC26.28■■□□□ 1.8
HFM1A2PYH4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HFM1A2PYH4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC26.27■■□□□ 1.8
HFM1A2PYH4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HFM1A2PYH4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HFM1A2PYH4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HFM1A2PYH4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
HFM1A2PYH4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HFM1A2PYH4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HFM1A2PYH4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC26.27■■□□□ 1.8
HFM1A2PYH4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
HFM1A2PYH4 KRT18P27-201ENST00000427733 1299 ntBASIC26.27■■□□□ 1.8
HFM1A2PYH4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HFM1A2PYH4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC26.27■■□□□ 1.8
HFM1A2PYH4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC26.27■■□□□ 1.8
HFM1A2PYH4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HFM1A2PYH4 AC006538.3-201ENST00000612495 578 ntBASIC26.27■■□□□ 1.8
HFM1A2PYH4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
HFM1A2PYH4 AC107918.4-202ENST00000641623 219 ntBASIC26.27■■□□□ 1.8
HFM1A2PYH4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HFM1A2PYH4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC26.27■■□□□ 1.8
HFM1A2PYH4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC26.27■■□□□ 1.8
HFM1A2PYH4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC26.26■■□□□ 1.8
HFM1A2PYH4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HFM1A2PYH4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
HFM1A2PYH4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
HFM1A2PYH4 AC009336.1-201ENST00000608941 1553 ntBASIC26.26■■□□□ 1.79
HFM1A2PYH4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
HFM1A2PYH4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
HFM1A2PYH4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
HFM1A2PYH4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC26.26■■□□□ 1.79
HFM1A2PYH4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC26.26■■□□□ 1.79
HFM1A2PYH4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC26.26■■□□□ 1.79
HFM1A2PYH4 AL022326.1-202ENST00000641533 845 ntBASIC26.26■■□□□ 1.79
HFM1A2PYH4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC26.26■■□□□ 1.79
HFM1A2PYH4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
HFM1A2PYH4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
HFM1A2PYH4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HFM1A2PYH4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HFM1A2PYH4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC26.26■■□□□ 1.79
HFM1A2PYH4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC26.26■■□□□ 1.79
HFM1A2PYH4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC26.26■■□□□ 1.79
HFM1A2PYH4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC26.26■■□□□ 1.79
HFM1A2PYH4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HFM1A2PYH4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HFM1A2PYH4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC26.25■■□□□ 1.79
HFM1A2PYH4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC26.25■■□□□ 1.79
HFM1A2PYH4 LAGE3P1-201ENST00000425356 484 ntBASIC26.25■■□□□ 1.79
HFM1A2PYH4 RPS2P1-201ENST00000434010 821 ntBASIC26.25■■□□□ 1.79
HFM1A2PYH4 PRYP5-201ENST00000451909 266 ntBASIC26.25■■□□□ 1.79
HFM1A2PYH4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC26.25■■□□□ 1.79
HFM1A2PYH4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
HFM1A2PYH4 AC012640.2-201ENST00000561606 901 ntBASIC26.25■■□□□ 1.79
HFM1A2PYH4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC26.25■■□□□ 1.79
HFM1A2PYH4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
HFM1A2PYH4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
HFM1A2PYH4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HFM1A2PYH4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
HFM1A2PYH4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HFM1A2PYH4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
HFM1A2PYH4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HFM1A2PYH4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HFM1A2PYH4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HFM1A2PYH4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
HFM1A2PYH4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
HFM1A2PYH4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HFM1A2PYH4 AL020989.1-201ENST00000422979 469 ntBASIC26.24■■□□□ 1.79
HFM1A2PYH4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC26.24■■□□□ 1.79
HFM1A2PYH4 GPALPP1-207ENST00000611650 899 ntBASIC26.24■■□□□ 1.79
HFM1A2PYH4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
HFM1A2PYH4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC26.24■■□□□ 1.79
HFM1A2PYH4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HFM1A2PYH4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC26.24■■□□□ 1.79
HFM1A2PYH4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HFM1A2PYH4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HFM1A2PYH4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
HFM1A2PYH4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HFM1A2PYH4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HFM1A2PYH4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
HFM1A2PYH4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms