Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 AK4P3-201ENST00000418260 669 ntBASIC16.16■□□□□ 0.18
TMEM129A0AVI4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 KRT18P35-201ENST00000510488 1269 ntBASIC16.16■□□□□ 0.18
TMEM129A0AVI4 AL445228.2-201ENST00000605589 952 ntBASIC16.16■□□□□ 0.18
TMEM129A0AVI4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 AL590326.2-201ENST00000625139 305 ntBASIC16.16■□□□□ 0.18
TMEM129A0AVI4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM129A0AVI4 CROCCP2-202ENST00000412962 2773 ntBASIC16.15■□□□□ 0.18
TMEM129A0AVI4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.15■□□□□ 0.18
TMEM129A0AVI4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.15■□□□□ 0.18
TMEM129A0AVI4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM129A0AVI4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TMEM129A0AVI4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 COX11P1-201ENST00000489116 835 ntBASIC16.14■□□□□ 0.17
TMEM129A0AVI4 YBX1P2-201ENST00000489612 999 ntBASIC16.14■□□□□ 0.17
TMEM129A0AVI4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 WWOX-216ENST00000569818 525 ntBASIC16.14■□□□□ 0.17
TMEM129A0AVI4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 AC011558.1-201ENST00000623459 338 ntBASIC16.14■□□□□ 0.17
TMEM129A0AVI4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 GPAT2P1-201ENST00000444924 1672 ntBASIC16.14■□□□□ 0.17
TMEM129A0AVI4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM129A0AVI4 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.14■□□□□ 0.17
TMEM129A0AVI4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms