Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC01711-201ENST00000598340 967 ntBASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 AC138894.3-201ENST00000603787 634 ntBASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 AC006538.3-201ENST00000612495 578 ntBASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 Z83836.1-201ENST00000624605 1642 ntBASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 AP002469.2-201ENST00000531724 424 ntBASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 SLC25A6P4-201ENST00000586535 553 ntBASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB1Q9Y5F3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 AC068880.1-201ENST00000507289 2297 ntBASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 LINC00602-201ENST00000629776 2065 ntBASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB1Q9Y5F3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB1Q9Y5F3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms