Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 SLC29A4P1-201ENST00000398760 971 ntBASIC16.92■□□□□ 0.3
AP4S1Q9Y587 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.92■□□□□ 0.3
AP4S1Q9Y587 AL023284.2-201ENST00000405850 579 ntBASIC16.92■□□□□ 0.3
AP4S1Q9Y587 AC004951.3-201ENST00000418645 1148 ntBASIC16.92■□□□□ 0.3
AP4S1Q9Y587 MCCD1P1-208ENST00000445732 328 ntBASIC16.92■□□□□ 0.3
AP4S1Q9Y587 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 DUTP2-201ENST00000519164 463 ntBASIC16.92■□□□□ 0.3
AP4S1Q9Y587 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
AP4S1Q9Y587 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 AC100803.2-201ENST00000562459 1963 ntBASIC16.91■□□□□ 0.3
AP4S1Q9Y587 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 AC083880.1-201ENST00000608266 535 ntBASIC16.91■□□□□ 0.3
AP4S1Q9Y587 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 FLJ38576-201ENST00000623820 2459 ntBASIC16.91■□□□□ 0.3
AP4S1Q9Y587 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4S1Q9Y587 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 CROCCP5-201ENST00000436658 830 ntBASIC16.9■□□□□ 0.3
AP4S1Q9Y587 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.9■□□□□ 0.3
AP4S1Q9Y587 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4S1Q9Y587 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms