Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 AL354751.1-201ENST00000412768 1863 ntBASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 MIR149-201ENST00000384879 89 ntBASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 AP005901.3-202ENST00000581653 237 ntBASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 AC104692.2-201ENST00000603054 253 ntBASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPIPA1Q9UND3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 AC007613.1-201ENST00000572811 2597 ntBASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 AC009102.3-201ENST00000623118 1491 ntBASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPA1Q9UND3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 KRT16P4-201ENST00000453883 522 ntBASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 AC079776.4-201ENST00000511039 504 ntBASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 AL121912.1-201ENST00000603683 238 ntBASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPA1Q9UND3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms