Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 CCR12P-201ENST00000446203 998 ntBASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 AC009065.1-201ENST00000564055 1225 ntBASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 AC009102.3-201ENST00000623118 1491 ntBASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 FLJ13224-201ENST00000313737 1514 ntBASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 AL163051.1-201ENST00000569214 1512 ntBASIC17.37■□□□□ 0.37
PCDHGB4Q9UN71 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 AC036111.1-201ENST00000533973 1582 ntBASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 MIR149-201ENST00000384879 89 ntBASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 HOXB1-202ENST00000577092 1414 ntBASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 AP001094.4-201ENST00000579008 2176 ntBASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGB4Q9UN71 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 KRT18P23-201ENST00000435622 1283 ntBASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 AL353719.1-201ENST00000566847 864 ntBASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 MIR4785-201ENST00000585005 73 ntBASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 Z99916.2-201ENST00000604037 246 ntBASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB4Q9UN71 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms