Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 GPR182-203ENST00000622922 591 ntBASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.09
RIMBP3Q9UFD9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC28.08■■■□□ 2.08
RIMBP3Q9UFD9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 AC003101.2-201ENST00000612557 442 ntBASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 AP006294.1-201ENST00000415407 339 ntBASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
RIMBP3Q9UFD9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 ELK2AP-201ENST00000392510 1007 ntBASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 SPDYE12P-201ENST00000618416 771 ntBASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 AC129492.6-201ENST00000611383 1305 ntBASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RIMBP3Q9UFD9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 LINC01225-203ENST00000563550 1244 ntBASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 AL049757.1-201ENST00000616842 1596 ntBASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC28.05■■■□□ 2.08
RIMBP3Q9UFD9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RIMBP3Q9UFD9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 ALG1L8P-201ENST00000533887 760 ntBASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 TCF3P1-201ENST00000423021 1937 ntBASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 UXT-AS1-201ENST00000590504 1525 ntBASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 KRT223P-202ENST00000449164 1292 ntBASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC28.03■■■□□ 2.08
RIMBP3Q9UFD9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
RIMBP3Q9UFD9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
RIMBP3Q9UFD9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
RIMBP3Q9UFD9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC28.02■■■□□ 2.08
RIMBP3Q9UFD9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
RIMBP3Q9UFD9 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RIMBP3Q9UFD9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
RIMBP3Q9UFD9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
RIMBP3Q9UFD9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RIMBP3Q9UFD9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms