Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 DUTP2-201ENST00000519164 463 ntBASIC16.8■□□□□ 0.28
CTSFQ9UBX1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 AC008608.2-201ENST00000606089 416 ntBASIC16.8■□□□□ 0.28
CTSFQ9UBX1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTSFQ9UBX1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 MRPL3P1-201ENST00000400109 1033 ntBASIC16.79■□□□□ 0.28
CTSFQ9UBX1 AC007967.3-201ENST00000434308 558 ntBASIC16.79■□□□□ 0.28
CTSFQ9UBX1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 SLC25A6P4-201ENST00000586535 553 ntBASIC16.79■□□□□ 0.28
CTSFQ9UBX1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 AP001269.4-201ENST00000609611 512 ntBASIC16.79■□□□□ 0.28
CTSFQ9UBX1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 NOC2LP1-202ENST00000452600 2235 ntBASIC16.79■□□□□ 0.28
CTSFQ9UBX1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.79■□□□□ 0.28
CTSFQ9UBX1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 AC022898.2-201ENST00000616822 1312 ntBASIC16.78■□□□□ 0.28
CTSFQ9UBX1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.78■□□□□ 0.28
CTSFQ9UBX1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms