Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD7Q9P2D1 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.8■□□□□ 0.6
CHD7Q9P2D1 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.8■□□□□ 0.6
CHD7Q9P2D1 AL121761.2-201ENST00000598007 1648 ntBASIC18.8■□□□□ 0.6
CHD7Q9P2D1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 RNA5SP421-201ENST00000516864 134 ntBASIC18.8■□□□□ 0.6
CHD7Q9P2D1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 DUX4L17-201ENST00000557360 1267 ntBASIC18.8■□□□□ 0.6
CHD7Q9P2D1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 KLF4P1-201ENST00000412782 1185 ntBASIC18.8■□□□□ 0.6
CHD7Q9P2D1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 HLA-V-201ENST00000429037 534 ntBASIC18.8■□□□□ 0.6
CHD7Q9P2D1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 DUX4L27-201ENST00000554796 1261 ntBASIC18.8■□□□□ 0.6
CHD7Q9P2D1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.8■□□□□ 0.6
CHD7Q9P2D1 AC073592.5-201ENST00000624854 528 ntBASIC18.8■□□□□ 0.6
CHD7Q9P2D1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 AC096734.2-201ENST00000562054 433 ntBASIC18.79■□□□□ 0.6
CHD7Q9P2D1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 CLDN5-201ENST00000403084 2357 ntBASIC18.79■□□□□ 0.6
CHD7Q9P2D1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHD7Q9P2D1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 AL627223.1-201ENST00000416693 442 ntBASIC18.78■□□□□ 0.6
CHD7Q9P2D1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 FAM58DP-201ENST00000428076 619 ntBASIC18.78■□□□□ 0.6
CHD7Q9P2D1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 AC099522.2-201ENST00000607001 744 ntBASIC18.78■□□□□ 0.6
CHD7Q9P2D1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 AC025678.2-201ENST00000562061 970 ntBASIC18.78■□□□□ 0.6
CHD7Q9P2D1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.78■□□□□ 0.6
CHD7Q9P2D1 AC018445.3-201ENST00000624177 1945 ntBASIC18.77■□□□□ 0.6
CHD7Q9P2D1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CHD7Q9P2D1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD7Q9P2D1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD7Q9P2D1 AC236430.1-201ENST00000402231 743 ntBASIC18.77■□□□□ 0.6
CHD7Q9P2D1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.77■□□□□ 0.6
CHD7Q9P2D1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.77■□□□□ 0.6
CHD7Q9P2D1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD7Q9P2D1 AC004835.2-201ENST00000603762 682 ntBASIC18.77■□□□□ 0.6
CHD7Q9P2D1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.77■□□□□ 0.6
CHD7Q9P2D1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CHD7Q9P2D1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHD7Q9P2D1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHD7Q9P2D1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.77■□□□□ 0.59
CHD7Q9P2D1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.77■□□□□ 0.59
CHD7Q9P2D1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHD7Q9P2D1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD7Q9P2D1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms