Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 MFAP1P1-201ENST00000442257 1255 ntBASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 SDHAP2-201ENST00000455183 2001 ntBASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SPTLC3Q9NUV7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 CD99P1-205ENST00000527459 561 ntBASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 SLC25A1P4-201ENST00000567977 778 ntBASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 AL359736.2-201ENST00000621992 437 ntBASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.68■□□□□ 0.74
SPTLC3Q9NUV7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 LINC00304-203ENST00000565008 1864 ntBASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 MIR4674-201ENST00000582457 87 ntBASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 CD177P1-201ENST00000606252 935 ntBASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 AC008741.2-201ENST00000612792 3115 ntBASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.67■□□□□ 0.74
SPTLC3Q9NUV7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTLC3Q9NUV7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms