Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 AC004980.1-204ENST00000429707 299 ntBASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 AC116562.2-201ENST00000507042 360 ntBASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2LQ9NUG4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 CKBP1-201ENST00000565489 1086 ntBASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.02■□□□□ 0.32
CCM2LQ9NUG4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 AC099343.3-201ENST00000605834 2503 ntBASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CCM2LQ9NUG4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 AC009102.3-201ENST00000623118 1491 ntBASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 AC006011.2-201ENST00000621313 1158 ntBASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCM2LQ9NUG4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms