Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ECHDC1Q9NTX5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ECHDC1Q9NTX5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
ECHDC1Q9NTX5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 GNAS-203ENST00000306120 1878 ntBASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 KRT17P6-201ENST00000453795 1220 ntBASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ECHDC1Q9NTX5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 AC010460.3-201ENST00000511359 1579 ntBASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 IGHV3-47-201ENST00000425060 335 ntBASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ECHDC1Q9NTX5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 AP000867.3-201ENST00000524675 377 ntBASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.74■■□□□ 1.07
ECHDC1Q9NTX5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ECHDC1Q9NTX5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms