Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HINT3Q9NQE9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 AC084018.2-201ENST00000613093 2607 ntBASIC16.16■□□□□ 0.18
HINT3Q9NQE9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
HINT3Q9NQE9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 TERF1P1-201ENST00000311003 1181 ntBASIC16.15■□□□□ 0.18
HINT3Q9NQE9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 RCN1P1-201ENST00000400413 996 ntBASIC16.15■□□□□ 0.18
HINT3Q9NQE9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.15■□□□□ 0.18
HINT3Q9NQE9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 AC092865.7-201ENST00000641832 219 ntBASIC16.15■□□□□ 0.18
HINT3Q9NQE9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.15■□□□□ 0.18
HINT3Q9NQE9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HINT3Q9NQE9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.14■□□□□ 0.18
HINT3Q9NQE9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 LINC00304-203ENST00000565008 1864 ntBASIC16.14■□□□□ 0.17
HINT3Q9NQE9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HINT3Q9NQE9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.14■□□□□ 0.17
HINT3Q9NQE9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms