Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4Q9NQC3 KRT8P8-201ENST00000434750 1448 ntBASIC21.12■□□□□ 0.97
RTN4Q9NQC3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 LINC02139-201ENST00000612023 2005 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 DUSP5P2-201ENST00000426873 1033 ntBASIC21.12■□□□□ 0.97
RTN4Q9NQC3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 IRX1P1-201ENST00000438849 1838 ntBASIC21.12■□□□□ 0.97
RTN4Q9NQC3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN4Q9NQC3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 MIR663A-201ENST00000385250 93 ntBASIC21.11■□□□□ 0.97
RTN4Q9NQC3 AC026185.1-201ENST00000445748 174 ntBASIC21.11■□□□□ 0.97
RTN4Q9NQC3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 IKBKGP1-201ENST00000612193 1073 ntBASIC21.11■□□□□ 0.97
RTN4Q9NQC3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RTN4Q9NQC3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 AC104581.4-201ENST00000623126 3052 ntBASIC21.1■□□□□ 0.97
RTN4Q9NQC3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 CROCCP5-201ENST00000436658 830 ntBASIC21.1■□□□□ 0.97
RTN4Q9NQC3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms