Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 AC090616.6-201ENST00000582640 721 ntBASIC15.29■□□□□ 0.04
GCM1Q9NP62 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 AC093458.2-201ENST00000623150 629 ntBASIC15.29■□□□□ 0.04
GCM1Q9NP62 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 AC093010.1-201ENST00000473625 1624 ntBASIC15.28■□□□□ 0.04
GCM1Q9NP62 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 TSPY12P-201ENST00000421279 868 ntBASIC15.28■□□□□ 0.04
GCM1Q9NP62 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 GUSBP12-201ENST00000513727 720 ntBASIC15.28■□□□□ 0.04
GCM1Q9NP62 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 IGHV3-41-201ENST00000613121 348 ntBASIC15.28■□□□□ 0.04
GCM1Q9NP62 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.28■□□□□ 0.04
GCM1Q9NP62 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.28■□□□□ 0.04
GCM1Q9NP62 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.28■□□□□ 0.04
GCM1Q9NP62 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCM1Q9NP62 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.27■□□□□ 0.04
GCM1Q9NP62 BICD1-207ENST00000551848 1962 ntBASIC15.27■□□□□ 0.04
GCM1Q9NP62 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
GCM1Q9NP62 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.27■□□□□ 0.04
GCM1Q9NP62 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.27■□□□□ 0.04
GCM1Q9NP62 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.27■□□□□ 0.04
GCM1Q9NP62 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.27■□□□□ 0.04
GCM1Q9NP62 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GCM1Q9NP62 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.27■□□□□ 0.04
GCM1Q9NP62 AC132938.6-201ENST00000623828 1655 ntBASIC15.27■□□□□ 0.03
GCM1Q9NP62 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
GCM1Q9NP62 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GCM1Q9NP62 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GCM1Q9NP62 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GCM1Q9NP62 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GCM1Q9NP62 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.27■□□□□ 0.03
GCM1Q9NP62 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
GCM1Q9NP62 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCM1Q9NP62 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms