Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 AC073508.3-201ENST00000619697 1419 ntBASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 AC010203.1-204ENST00000548782 407 ntBASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEUROD4Q9HD90 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NEUROD4Q9HD90 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NEUROD4Q9HD90 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
NEUROD4Q9HD90 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NEUROD4Q9HD90 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.89■□□□□ 0.3
NEUROD4Q9HD90 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.89■□□□□ 0.3
NEUROD4Q9HD90 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 BX664615.1-201ENST00000443558 458 ntBASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 AC104076.2-201ENST00000448912 469 ntBASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.89■□□□□ 0.29
NEUROD4Q9HD90 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 AL391807.1-203ENST00000604392 2365 ntBASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 STARP1-201ENST00000397973 869 ntBASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 FAM8A6P-201ENST00000407496 1135 ntBASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.88■□□□□ 0.29
NEUROD4Q9HD90 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms