Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SH2D4AQ9H788 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SH2D4AQ9H788 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.79■□□□□ 0.92
SH2D4AQ9H788 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SH2D4AQ9H788 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.79■□□□□ 0.92
SH2D4AQ9H788 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH2D4AQ9H788 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH2D4AQ9H788 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
SH2D4AQ9H788 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH2D4AQ9H788 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
SH2D4AQ9H788 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH2D4AQ9H788 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 AC103564.2-201ENST00000432853 1299 ntBASIC20.77■□□□□ 0.92
SH2D4AQ9H788 HNRNPDP1-201ENST00000439535 754 ntBASIC20.77■□□□□ 0.92
SH2D4AQ9H788 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH2D4AQ9H788 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SH2D4AQ9H788 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SH2D4AQ9H788 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SH2D4AQ9H788 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 HCG11-201ENST00000411553 5696 ntBASIC20.76■□□□□ 0.91
SH2D4AQ9H788 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 OR7E14P-202ENST00000530490 1290 ntBASIC20.76■□□□□ 0.91
SH2D4AQ9H788 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 AL049840.3-201ENST00000602669 611 ntBASIC20.76■□□□□ 0.91
SH2D4AQ9H788 AC117500.6-201ENST00000624871 588 ntBASIC20.76■□□□□ 0.91
SH2D4AQ9H788 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms