Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC009949.1-201ENST00000623048 1830 ntBASIC19.25■□□□□ 0.67
NXF3Q9H4D5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.25■□□□□ 0.67
NXF3Q9H4D5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 COX5BP2-201ENST00000392354 334 ntBASIC19.25■□□□□ 0.67
NXF3Q9H4D5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 AC025062.2-201ENST00000605477 670 ntBASIC19.25■□□□□ 0.67
NXF3Q9H4D5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 AL139288.1-201ENST00000623748 933 ntBASIC19.25■□□□□ 0.67
NXF3Q9H4D5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 AL020996.1-203ENST00000536896 2307 ntBASIC19.25■□□□□ 0.67
NXF3Q9H4D5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 IL9RP2-201ENST00000423948 1312 ntBASIC19.25■□□□□ 0.67
NXF3Q9H4D5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 PMPCAP1-201ENST00000508114 1576 ntBASIC19.24■□□□□ 0.67
NXF3Q9H4D5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 RPS2P1-201ENST00000434010 821 ntBASIC19.24■□□□□ 0.67
NXF3Q9H4D5 SLC25A1P1-201ENST00000528351 927 ntBASIC19.24■□□□□ 0.67
NXF3Q9H4D5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 NKAPP1-205ENST00000585790 367 ntBASIC19.24■□□□□ 0.67
NXF3Q9H4D5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.24■□□□□ 0.67
NXF3Q9H4D5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NXF3Q9H4D5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 AD001527.2-201ENST00000622994 785 ntBASIC19.23■□□□□ 0.67
NXF3Q9H4D5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NXF3Q9H4D5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms