Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 CHCHD2P8-201ENST00000429873 447 ntBASIC16.58■□□□□ 0.24
UBQLN3Q9H347 AP002383.4-201ENST00000442518 975 ntBASIC16.58■□□□□ 0.24
UBQLN3Q9H347 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 AL024508.2-201ENST00000607749 1894 ntBASIC16.58■□□□□ 0.24
UBQLN3Q9H347 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 HCG4P8-203ENST00000443049 980 ntBASIC16.57■□□□□ 0.24
UBQLN3Q9H347 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 MIR3180-1-201ENST00000580374 94 ntBASIC16.57■□□□□ 0.24
UBQLN3Q9H347 MIR3180-3-201ENST00000584616 94 ntBASIC16.57■□□□□ 0.24
UBQLN3Q9H347 AC008687.5-201ENST00000593746 558 ntBASIC16.57■□□□□ 0.24
UBQLN3Q9H347 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBQLN3Q9H347 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 AC113404.2-201ENST00000507884 177 ntBASIC16.56■□□□□ 0.24
UBQLN3Q9H347 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms