Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 PVRIG2P-201ENST00000435460 978 ntBASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 AC009947.2-201ENST00000444014 672 ntBASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 TMEM191A-211ENST00000637163 1067 ntBASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 AC099398.1-201ENST00000567919 2776 ntBASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.55■□□□□ 0.24
POLR2J3Q9H1A7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 AC113404.2-201ENST00000507884 177 ntBASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 MIR4497-201ENST00000583208 89 ntBASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR2J3Q9H1A7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 AC024243.1-201ENST00000609234 778 ntBASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 AC116407.2-201ENST00000613639 860 ntBASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 AC010947.1-201ENST00000623454 693 ntBASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR2J3Q9H1A7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms