Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 AP002982.1-201ENST00000492365 877 ntBASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFAF3Q9BU61 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 AC104417.2-201ENST00000562989 1793 ntBASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 AF186192.3-201ENST00000583427 947 ntBASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 LINC01023-201ENST00000606054 436 ntBASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NDUFAF3Q9BU61 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.85□□□□□ -0.19
NDUFAF3Q9BU61 BX088651.1-201ENST00000540551 451 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms