Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PTPN18Q99952 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN18Q99952 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN18Q99952 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN18Q99952 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN18Q99952 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN18Q99952 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PTPN18Q99952 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN18Q99952 KLF4P1-201ENST00000412782 1185 ntBASIC20.35■□□□□ 0.85
PTPN18Q99952 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN18Q99952 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.35■□□□□ 0.85
PTPN18Q99952 AC022145.2-201ENST00000598203 171 ntBASIC20.35■□□□□ 0.85
PTPN18Q99952 AL390955.2-201ENST00000603032 514 ntBASIC20.35■□□□□ 0.85
PTPN18Q99952 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PTPN18Q99952 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN18Q99952 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN18Q99952 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PTPN18Q99952 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN18Q99952 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN18Q99952 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN18Q99952 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN18Q99952 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN18Q99952 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN18Q99952 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN18Q99952 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN18Q99952 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN18Q99952 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.34■□□□□ 0.85
PTPN18Q99952 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN18Q99952 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.34■□□□□ 0.85
PTPN18Q99952 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.34■□□□□ 0.85
PTPN18Q99952 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.34■□□□□ 0.85
PTPN18Q99952 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PTPN18Q99952 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.34■□□□□ 0.85
PTPN18Q99952 AC023141.13-201ENST00000604991 943 ntBASIC20.34■□□□□ 0.85
PTPN18Q99952 AC019129.2-201ENST00000609837 1235 ntBASIC20.34■□□□□ 0.85
PTPN18Q99952 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PTPN18Q99952 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN18Q99952 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN18Q99952 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN18Q99952 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN18Q99952 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN18Q99952 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN18Q99952 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN18Q99952 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN18Q99952 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PTPN18Q99952 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN18Q99952 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.33■□□□□ 0.85
PTPN18Q99952 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN18Q99952 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN18Q99952 AC003669.1-201ENST00000334569 611 ntBASIC20.33■□□□□ 0.85
PTPN18Q99952 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN18Q99952 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.33■□□□□ 0.85
PTPN18Q99952 AP002414.1-201ENST00000391405 1147 ntBASIC20.33■□□□□ 0.85
PTPN18Q99952 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN18Q99952 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.33■□□□□ 0.85
PTPN18Q99952 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.33■□□□□ 0.85
PTPN18Q99952 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.33■□□□□ 0.85
PTPN18Q99952 AC025678.2-201ENST00000562061 970 ntBASIC20.33■□□□□ 0.85
PTPN18Q99952 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN18Q99952 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
PTPN18Q99952 AL121761.2-201ENST00000598007 1648 ntBASIC20.33■□□□□ 0.84
PTPN18Q99952 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.33■□□□□ 0.84
PTPN18Q99952 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.33■□□□□ 0.84
PTPN18Q99952 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.33■□□□□ 0.84
PTPN18Q99952 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN18Q99952 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN18Q99952 AC005332.7-201ENST00000614046 2005 ntBASIC20.32■□□□□ 0.84
PTPN18Q99952 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN18Q99952 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN18Q99952 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN18Q99952 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN18Q99952 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN18Q99952 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN18Q99952 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN18Q99952 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PTPN18Q99952 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN18Q99952 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN18Q99952 AC093520.2-201ENST00000561830 333 ntBASIC20.32■□□□□ 0.84
PTPN18Q99952 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN18Q99952 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN18Q99952 LINC00628-201ENST00000628516 1289 ntBASIC20.32■□□□□ 0.84
PTPN18Q99952 AC007064.4-201ENST00000637740 555 ntBASIC20.32■□□□□ 0.84
PTPN18Q99952 CLDN5-201ENST00000403084 2357 ntBASIC20.32■□□□□ 0.84
PTPN18Q99952 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN18Q99952 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTPN18Q99952 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PTPN18Q99952 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN18Q99952 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
PTPN18Q99952 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN18Q99952 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN18Q99952 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN18Q99952 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN18Q99952 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN18Q99952 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN18Q99952 AC093010.1-201ENST00000473625 1624 ntBASIC20.31■□□□□ 0.84
PTPN18Q99952 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PTPN18Q99952 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN18Q99952 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PTPN18Q99952 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN18Q99952 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms