Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.03■□□□□ 0.48
PHOX2BQ99453 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 AC093214.1-201ENST00000511688 1107 ntBASIC18.03■□□□□ 0.48
PHOX2BQ99453 AP000344.2-201ENST00000512987 629 ntBASIC18.03■□□□□ 0.48
PHOX2BQ99453 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 AP005018.1-201ENST00000525475 301 ntBASIC18.03■□□□□ 0.48
PHOX2BQ99453 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 NEFHP1-201ENST00000412845 2629 ntBASIC18.03■□□□□ 0.48
PHOX2BQ99453 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHOX2BQ99453 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.03■□□□□ 0.48
PHOX2BQ99453 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.02■□□□□ 0.48
PHOX2BQ99453 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 AC006333.2-201ENST00000607957 2099 ntBASIC18.02■□□□□ 0.48
PHOX2BQ99453 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 KRT18P27-201ENST00000427733 1299 ntBASIC18.02■□□□□ 0.48
PHOX2BQ99453 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 TERF1P3-201ENST00000505638 1227 ntBASIC18.02■□□□□ 0.48
PHOX2BQ99453 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 RN7SL204P-201ENST00000582831 262 ntBASIC18.02■□□□□ 0.48
PHOX2BQ99453 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PHOX2BQ99453 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHOX2BQ99453 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PHOX2BQ99453 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PHOX2BQ99453 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PHOX2BQ99453 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.02■□□□□ 0.47
PHOX2BQ99453 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PHOX2BQ99453 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.02■□□□□ 0.47
PHOX2BQ99453 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PHOX2BQ99453 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 AC073621.1-201ENST00000392730 636 ntBASIC18.01■□□□□ 0.47
PHOX2BQ99453 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 AC093484.2-201ENST00000580996 2166 ntBASIC18.01■□□□□ 0.47
PHOX2BQ99453 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHOX2BQ99453 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.01■□□□□ 0.47
PHOX2BQ99453 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PHOX2BQ99453 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms