Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TWNKQ96RR1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TWNKQ96RR1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 DUSP5P1-201ENST00000441325 1139 ntBASIC18.94■□□□□ 0.62
TWNKQ96RR1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 AC096582.2-201ENST00000510860 516 ntBASIC18.94■□□□□ 0.62
TWNKQ96RR1 FOSL1P1-201ENST00000511041 816 ntBASIC18.94■□□□□ 0.62
TWNKQ96RR1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 TP73-AS1-210ENST00000637775 1455 ntBASIC18.94■□□□□ 0.62
TWNKQ96RR1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 AC097374.2-201ENST00000618617 1306 ntBASIC18.94■□□□□ 0.62
TWNKQ96RR1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TWNKQ96RR1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TWNKQ96RR1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 AC134043.2-201ENST00000624206 2238 ntBASIC18.93■□□□□ 0.62
TWNKQ96RR1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
TWNKQ96RR1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TWNKQ96RR1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TWNKQ96RR1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TWNKQ96RR1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TWNKQ96RR1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.92■□□□□ 0.62
TWNKQ96RR1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TWNKQ96RR1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.92■□□□□ 0.62
TWNKQ96RR1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TWNKQ96RR1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TWNKQ96RR1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TWNKQ96RR1 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.92■□□□□ 0.62
TWNKQ96RR1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TWNKQ96RR1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TWNKQ96RR1 RCN1P2-201ENST00000398357 915 ntBASIC18.92■□□□□ 0.62
TWNKQ96RR1 NUS1P2-201ENST00000417358 873 ntBASIC18.92■□□□□ 0.62
TWNKQ96RR1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.92■□□□□ 0.62
TWNKQ96RR1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.92■□□□□ 0.62
TWNKQ96RR1 NUS1P1-201ENST00000446295 882 ntBASIC18.92■□□□□ 0.62
TWNKQ96RR1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TWNKQ96RR1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.92■□□□□ 0.62
TWNKQ96RR1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.92■□□□□ 0.62
TWNKQ96RR1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.92■□□□□ 0.62
TWNKQ96RR1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TWNKQ96RR1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TWNKQ96RR1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TWNKQ96RR1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms