Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HHIPQ96QV1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.04■□□□□ 0.48
HHIPQ96QV1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.04■□□□□ 0.48
HHIPQ96QV1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.04■□□□□ 0.48
HHIPQ96QV1 BX005266.1-201ENST00000473402 457 ntBASIC18.04■□□□□ 0.48
HHIPQ96QV1 AC112482.1-201ENST00000492080 688 ntBASIC18.04■□□□□ 0.48
HHIPQ96QV1 RNA5SP416-201ENST00000516838 111 ntBASIC18.04■□□□□ 0.48
HHIPQ96QV1 AC040169.1-201ENST00000565382 521 ntBASIC18.04■□□□□ 0.48
HHIPQ96QV1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.04■□□□□ 0.48
HHIPQ96QV1 AP001160.2-201ENST00000596071 487 ntBASIC18.04■□□□□ 0.48
HHIPQ96QV1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.04■□□□□ 0.48
HHIPQ96QV1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HHIPQ96QV1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.04■□□□□ 0.48
HHIPQ96QV1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HHIPQ96QV1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.04■□□□□ 0.48
HHIPQ96QV1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HHIPQ96QV1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HHIPQ96QV1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HHIPQ96QV1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HHIPQ96QV1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HHIPQ96QV1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HHIPQ96QV1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HHIPQ96QV1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HHIPQ96QV1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.03■□□□□ 0.48
HHIPQ96QV1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HHIPQ96QV1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HHIPQ96QV1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HHIPQ96QV1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HHIPQ96QV1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.02■□□□□ 0.48
HHIPQ96QV1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.02■□□□□ 0.48
HHIPQ96QV1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.02■□□□□ 0.48
HHIPQ96QV1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HHIPQ96QV1 PMS2P2-201ENST00000425039 1128 ntBASIC18.02■□□□□ 0.48
HHIPQ96QV1 LAGE3P1-201ENST00000425356 484 ntBASIC18.02■□□□□ 0.48
HHIPQ96QV1 HMGN1P19-201ENST00000436976 333 ntBASIC18.02■□□□□ 0.48
HHIPQ96QV1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.02■□□□□ 0.48
HHIPQ96QV1 DNAJB3-201ENST00000446806 729 ntBASIC18.02■□□□□ 0.48
HHIPQ96QV1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
HHIPQ96QV1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.02■□□□□ 0.48
HHIPQ96QV1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.02■□□□□ 0.48
HHIPQ96QV1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.02■□□□□ 0.48
HHIPQ96QV1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
HHIPQ96QV1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HHIPQ96QV1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HHIPQ96QV1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HHIPQ96QV1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.02■□□□□ 0.47
HHIPQ96QV1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HHIPQ96QV1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.02■□□□□ 0.47
HHIPQ96QV1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HHIPQ96QV1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HHIPQ96QV1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HHIPQ96QV1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HHIPQ96QV1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HHIPQ96QV1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.01■□□□□ 0.47
HHIPQ96QV1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HHIPQ96QV1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HHIPQ96QV1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.01■□□□□ 0.47
HHIPQ96QV1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HHIPQ96QV1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HHIPQ96QV1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
HHIPQ96QV1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HHIPQ96QV1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HHIPQ96QV1 AC023274.1-201ENST00000418278 595 ntBASIC18.01■□□□□ 0.47
HHIPQ96QV1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.01■□□□□ 0.47
HHIPQ96QV1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HHIPQ96QV1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HHIPQ96QV1 AC004967.1-201ENST00000453589 447 ntBASIC18.01■□□□□ 0.47
HHIPQ96QV1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HHIPQ96QV1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.01■□□□□ 0.47
HHIPQ96QV1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.01■□□□□ 0.47
HHIPQ96QV1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.01■□□□□ 0.47
HHIPQ96QV1 AL355385.1-201ENST00000606123 409 ntBASIC18.01■□□□□ 0.47
HHIPQ96QV1 AP000867.4-201ENST00000641616 219 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms